Research Data

2024

1. A1_SampleSheet.csv

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2. A_0_Download_data.sh

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3. A_1_Demultiplexing.sh

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4. A_2_Renaming_fastq_files.sh

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5. B_1_Merge_read_pairs.sh

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6. B_2_Filter_merged_reads.sh

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7. B_3_Map_filtered_reads.sh

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8. B_4_Create_bamlist_README.sh

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9. B_5_coverage_PotatoMASH_339_core.bed

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10. B_5_coverage_per_locus.sh

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11. C_1_SNPcalling_no_indels.sh

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12. C_2_SNP_filtering_README.sh

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13. D_1_PotatoMASH_core_339_SMAPv4_DMv6_1.bed

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14. D_1_SMAPv4haplotype-sites_diploids.sh

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15. D_1_SMAPv4haplotype-sites_tetraploids.sh

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16. E_1_SNP_allele_dosage_calculator_diploids.sh

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17. E_1_SNP_allele_dosage_calculator_tetraploids.sh

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